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More than a billion years ago, aerobic bacteria colonized
primordial eukaryotic cells that lacked the ability to use oxygen
metabolically. A symbiotic relationship developed and became permanent.
The bacteria evolved into mitochondria, thus endowing the host cells with
aerobic metabolism, a much more efficient way to produce energy than
anaerobic glycolysis. Structurally, mitochondria have four compartments:
the outer membrane, the inner membrane, the intermembrane space, and the
matrix (the region inside the inner membrane). They perform numerous
tasks, such as pyruvate oxidation, the Krebs cycle, and metabolism of
amino acids, fatty acids, and steroids, but the most crucial is probably
the generation of energy as adenosine triphosphate (ATP), by means of the
electron-transport chain and the oxidative-phosphorylation system (the
"respiratory chain") (Figure 1). The spirals represent the spiral of reactions of the -oxidation pathway, resulting in the liberation of acetyl–coenzyme A (CoA) and the reduction of flavoprotein. ADP denotes adenosine diphosphate, ATP adenosine triphosphate, ANT adenine nucleotide translocator, CACT carnitine–acylcarnitine translocase, CoQ coenzyme Q, CPT carnitine palmitoyltransferase, DIC dicarboxylate carrier, ETF electron-transfer flavoprotein, ETF-DH electron-transfer dehydrogenase, FAD flavin adenine dinucleotide, FADH2 reduced FAD, NADH reduced nicotinamide adenine dinucleotide, PDHC pyruvate dehydrogenase complex, TCA tricarboxylic acid, I complex I, II complex II, III complex III, IV complex IV, and V complex V. The respiratory chain, located in the inner mitochondrial membrane, consists of five multimeric protein complexes (Figure 2B): reduced nicotinamide adenine dinucleotide (NADH) dehydrogenase–ubiquinone oxidoreductase (complex I, approximately 46 subunits), succinate dehydrogenase–ubiquinone oxidoreductase (complex II, 4 subunits), ubiquinone–cytochrome c oxidoreductase (complex III, 11 subunits), cytochrome c oxidase (complex IV, 13 subunits), and ATP synthase (complex V, approximately 16 subunits). The respiratory chain also requires two small electron carriers, ubiquinone (coenzyme Q10) and cytochrome c.
Mitochondria are the only organelles of the cell besides the nucleus that contain their own DNA (called mtDNA) and their own machinery for synthesizing RNA and proteins. There are hundreds or thousands of mitochondria per cell, and each contains approximately five mitochondrial genomes. Because mtDNA has only 37 genes, most of the approximately 900 gene products in the organelle are encoded by nuclear DNA (nDNA) and are imported from the cytoplasm. Defects in any of the numerous mitochondrial pathways can cause mitochondrial diseases, but we will confine our discussion to disorders of the respiratory chain. Because many of them involve brain and skeletal muscle, these disorders are also known as mitochondrial encephalomyopathies. The fact that the respiratory chain is under dual genetic control makes these disorders particularly fascinating, because they involve both mendelian and mitochondrial genetics. Moreover, these diseases are not as rare as commonly believed; their estimated prevalence of 10 to 15 cases per 100,000 persons is similar to that of better known neurologic diseases, such as amyotrophic lateral sclerosis and the muscular dystrophies.3 The genetic classification of the primary mitochondrial diseases distinguishes disorders due to defects in mtDNA, which are inherited according to the rules of mitochondrial genetics, from those due to defects in nDNA, which are transmitted by mendelian inheritance. Since the discovery of the first pathogenic mutations in human mtDNA a mere 15 years ago,4,5 the increase in our knowledge of the role of mitochondria in disease has exceeded all expectations. Mitochondrial Genetics The human mtDNA is a 16,569-bp, double-stranded, circular molecule containing 37 genes (Figure 2A). Of these, 24 are needed for mtDNA translation (2 ribosomal RNAs [rRNAs] and 22 transfer RNAs [tRNAs]), and 13 encode subunits of the respiratory chain: seven subunits of complex I (ND1, 2, 3, 4, 4L, 5, and 6 [ND stands for NADH dehydrogenase]), one subunit of complex III (cytochrome b), three subunits of cytochrome c oxidase (COX I, II, and III), and two subunits of ATP synthase (A6 and A8). Mitochondrial genetics differs from mendelian genetics in three major aspects: maternal inheritance, heteroplasmy, and mitotic segregation. Maternal Inheritance As a general rule, all mitochondria (and all mtDNAs) in the zygote derive from the ovum. Therefore, a mother carrying an mtDNA mutation passes it on to all her children, but only her daughters will transmit it to their progeny. Recent evidence of paternal transmission of mtDNA in skeletal muscle (but not in other tissues) in a patient with a mitochondrial myopathy6 serves as an important warning that maternal inheritance of mtDNA is not an absolute rule, but it does not negate the primacy of maternal inheritance in mtDNA-related diseases. Heteroplasmy and the Threshold Effect There are thousands of mtDNA molecules in each cell, and in general, pathogenic mutations of mtDNA are present in some but not all of these genomes. As a result, cells and tissues harbor both normal (wild-type) and mutant mtDNA, a situation known as heteroplasmy. Heteroplasmy can also exist at the organellar level: a single mitochondrion can harbor both normal and mutant mtDNAs. In normal subjects, all mtDNAs are identical (homoplasmy). Not surprisingly, a minimal number of mutant mtDNAs must be present before oxidative dysfunction occurs and clinical signs become apparent: this is the threshold effect. The threshold for disease is lower in tissues that are highly dependent on oxidative metabolism, such as brain, heart, skeletal muscle, retina, renal tubules, and endocrine glands. These tissues will therefore be especially vulnerable to the effects of pathogenic mutations in mtDNA. Mitotic Segregation The random redistribution of organelles at the time of cell division can change the proportion of mutant mtDNAs received by daughter cells; if and when the pathogenic threshold in a previously unaffected tissue is surpassed, the phenotype can also change. This explains the age-related, and even tissue-related, variability of clinical features frequently observed in mtDNA-related disorders. Respiratory-Chain Disorders Due to Defects in mtDNA The small mitochondrial genome contains many mutations that cause a
wide variety of clinical syndromes, as shown in Figure 3. 7 The genome is
peppered with mutations, although a few "hot spots" stand out. Relatively
few mutations have been found in rRNA genes, and all these are confined to
the 12S rRNA. Not shown on the map are the hundreds of different
pathogenic giant deletions of 2 to 10 kb, which invariably delete tRNA
genes.
Because mitochondria are ubiquitous, every tissue in the body can be
affected by mtDNA mutations, which is why mitochondrial diseases are often
multisystemic. Table 1 lists the most common mtDNA-related syndromes.
Certain constellations of symptoms and signs are characteristic of these
syndromes, and the diagnosis is relatively easy to establish in patients
with these typical features. However, as a result of heteroplasmy and the
threshold effect, different tissues harboring the same mtDNA mutation may
be affected to different degrees, thus explaining the frequent occurrence
of oligosymptomatic or asymptomatic carriers of the mutation within a
family. Selective organ involvement can also occur, presumably as a result
of skewed heteroplasmy (i.e., disproportionately high levels of the
mutation in a given tissue), as in mitochondrial diabetes,12 mitochondrial
cardiomyopathies,13 mitochondrial myopathies,8 and mitochondrial
deafness.14 The pathogenesis of these disorders is unclear, although impaired production of ATP most likely has a central role. This concept has been borne out by studies using cytoplasmic hybrid ("cybrid") cell cultures, which are established human cell lines that are depleted of their own mtDNA and then repopulated with the patient's mitochondria containing mutated genomes.16 The extraordinary variability of clinical presentations can largely be attributed to the peculiar rules of mitochondrial genetics, especially heteroplasmy and the threshold effect. For example, different mutational loads readily explain the different degrees of severity between the neuropathy, ataxia, and retinitis pigmentosa syndrome and maternally inherited Leigh's syndrome, two encephalomyopathies caused by the same genetic defect in the ATPase 6 gene.17 What is difficult to explain is the distinct "tissue proclivity" of seemingly similar mutations, especially in the brain — for example, the strokelike episodes in MELAS, the myoclonus in MERRF, and the pigmentary retinopathy in the Kearns–Sayre syndrome. High concentrations of each mutation in cerebral small vessels, in the dentate nucleus of the cerebellum, and in the retinal pigment epithelium, respectively, do not explain why the mutation is in that particular area of the brain. Conversely, many patients with mitochondrial diabetes have symptoms even though they have a relatively small amount of mutation, suggesting that the pathogenetic mechanism goes beyond a mere energy deficit. For example, diabetes may be the result of subtle interactions among oxidative energy levels and the glucose sensor,18 the NADH shuttle,19 and even uncoupling proteins.20 Even more puzzling, mutations that are ubiquitous often have tissue-specific effects (e.g., deafness due to mutations in 12S rRNA, cardiopathy due to mutations in tRNAIle, and optic atrophy due to mutations in ND genes). Studies of animal models with mtDNA mutations ("mito-mice")21,22 may provide some answers to these riddles. Respiratory-Chain Disorders Due to Defects in nDNA In recent years, interest has shifted toward mendelian genetics in mitochondrial disease. This shift is understandable, not only because most of the 75-plus respiratory-chain proteins are encoded by nDNA (Figure 2B), but also because proper assembly and function of respiratory chain complexes require approximately 60 additional (ancillary) nucleus-encoded proteins. Mutations in these genes can also cause mitochondrial disease.23 Mutations in Structural Components of the Respiratory Chain Mutations in structural components of the respiratory chain have thus far been found only in complexes I24 and II25,26,27 and have generally been associated with severe neurologic disorders of childhood, such as Leigh's syndrome and leukodystrophy.28 However, mutations in complex II have also been associated with paragangliomas29,30 and pheochromocytomas.31 Although its genetic basis remains unknown and it is likely to be heterogeneous, coenzyme Q10 deficiency is emerging as an important cause of autosomal recessive encephalomyopathies, ranging from predominantly myopathic forms (with recurrent myoglobinuria) to predominantly encephalopathic forms (with ataxia and cerebellar atrophy).32 Mutations in Ancillary Proteins of the Respiratory Chain No pathogenic mutations have been identified in any nDNA-encoded subunits of complex III, IV, or V, but defects of complexes III33,34 and IV35,36 have been related to mutations in ancillary proteins required for the assembly or insertion of cofactors. Cytochrome c oxidase deficiency is generalized in disorders that are due to mutations in genes required for the assembly of complex IV, but the enzyme defect and the symptoms are more severe in certain tissues; for example, mutations in the surfeit gene (SURF1) predominantly affect the brain and cause Leigh's syndrome, mutations in a gene required for the synthesis of cytochrome oxidase (SCO2) or in cytochrome c oxidase 15 (COX15)37 cause infantile cardiomyopathy in addition to brain disease, and mutations in cytochrome c oxidase 10 (COX10) and another gene for the synthesis of cytochrome oxidase (SCO1) affect kidney and liver tissues, respectively. Although pathogenic mutations may occur in structural subunits of complexes III, IV, and V, they may be lethal in utero because there is no metabolic compensation, and complex V is the sole site of oxidative phosphorylation38 (Figure 2B). This concept would apply only to the "all-or-none" type of mendelian inheritance, since mutations in mtDNA-encoded components of complexes III, IV, and V do indeed occur but are expressed incompletely because of heteroplasmy. Defects in Intergenomic Signaling Affecting Respiratory Function In the course of evolution, mitochondria lost their independence, and mtDNA is now the slave of nDNA, depending on numerous nucleus-encoded factors for its integrity and replication.39 Mutations in these factors affect mtDNA directly, either quantitatively or qualitatively, and cause diseases that are inherited as mendelian traits. A quantitative alteration is exemplified by abnormal reductions in the number of mtDNA molecules (both per cell and per organelle) — mtDNA-depletion syndromes. A qualitative alteration is exemplified by multiple deletions (in contrast to the single mtDNA deletions in sporadic Kearns–Sayre syndrome, progressive external ophthalmoplegia, and Pearson's syndrome). Ophthalmoplegia is the clinical hallmark of multiple mtDNA deletions,40 but patients with autosomal dominant progressive external ophthalmoplegia often have proximal limb weakness, peripheral neuropathy, sensorineural hearing loss, cataracts, endocrine dysfunction, and severe depression.41,42 Autosomal recessive progressive external ophthalmoplegia has two main clinical presentations: one consists of cardiomyopathy and ophthalmoplegia,43 and the other of peripheral neuropathy, gastrointestinal dysmotility, and leukoencephalopathy (mitochondrial neurogastrointestinal encephalomyopathy).44 Both quantitative and qualitative defects may result from impairment of the integrity of the mitochondrial genome. Such impairment can be direct (e.g., affecting proteins required for the replication and maintenance of mtDNA) or indirect (e.g., affecting proteins required to maintain nucleotide pools in mitochondria). For example, some families with autosomal dominant progressive external ophthalmoplegia have mutations in Twinkle, a mitochondrial protein similar to bacteriophage T7 primase/helicase, whereas other families have mutations in the mitochondrial adenine nucleotide translocator 1 (ANT1).45,46 Mutations in mitochondrial-specific DNA polymerase have been associated with both dominant and recessive multiple-deletion disorders.47 Mitochondrial neurogastrointestinal encephalomyopathy is clearly due to the loss of function of thymidine phosphorylase, resulting in markedly increased concentrations of thymidine in the blood.48 Thymidine phosphorylase is not a mitochondrial protein, yet it appears to have a selective effect on mitochondrial nucleotide pools required for maintaining the integrity and abundance of mtDNA. The role of nucleotides is bolstered by the pathogenicity of the ANT1 mutations and by recent findings that mutations in mitochondrial thymidine kinase49,50 and deoxyguanosine kinase51,52 are associated with the myopathic and hepatocerebral forms of mtDNA depletion. Knowledge of these mutations makes prenatal diagnosis feasible for some families with the infantile mtDNA-depletion syndromes and may offer new approaches to therapeutic intervention (e.g., lowering blood thymidine concentrations in patients with mitochondrial neurogastrointestinal encephalomyopathy). Defects of the Membrane Lipid Milieu Except for cytochrome c, which is located in the intermembrane space, all components of the respiratory chain are embedded in the lipid milieu of the inner mitochondrial membrane, which is composed predominantly of cardiolipin. Cardiolipin is not merely a scaffold but is an integral and indispensable part of some respiratory-chain components.53 It therefore stands to reason that defects in cardiolipin would cause respiratory-chain dysfunction and mitochondrial disease. This concept is exemplified by an X-linked disorder, Barth syndrome (mitochondrial myopathy, cardiomyopathy, growth retardation, and leukopenia).54 The mutated gene in Barth syndrome, G4.5, encodes a family of acyl–coenzyme A synthetases (tafazzins) that must have an important role in cardiolipin synthesis, because cardiolipin concentrations are markedly decreased in skeletal and cardiac muscle and in platelets from affected patients.55 Disorders with Indirect Involvement of the Respiratory Chain Indirect involvement of mitochondria has been documented or suggested in many conditions, including normal aging, late-onset neurodegenerative diseases, and cancer. However, the precise role of mitochondrial dysfunction in these conditions remains controversial. Defects of Mitochondrial Protein Importation Cytosolic proteins destined for mitochondria have mitochondrial targeting signals that enable them to be routed to the appropriate compartment within the organelle, where they are then refolded into an active configuration.56 Although a number of mutations in mitochondrial targeting signals have been found, few errors in the importation machinery itself are known, perhaps because they may be lethal.57 However, at least one such defect has been identified, the deafness–dystonia syndrome (Mohr–Tranebjaerg syndrome), an X-linked recessive disorder characterized by progressive neurosensory deafness, dystonia, cortical blindness, and psychiatric symptoms,58 features that are strikingly similar to those of the primary mitochondrial diseases. This disorder is due to mutations in TIMM8A, encoding the deafness–dystonia protein (DDP1), a component of the mitochondrial-protein–import machinery in the intermembrane space. According to a recent report, an autosomal dominant form of hereditary spastic paraplegia is associated with mutations in the mitochondrial import chaperonin HSP60.59 Defects in Mitochondrial Motility Mitochondria are not static organelles; they are propelled within the cell by energy-requiring dynamins along cytoskeletal microtubule "rails."60 Mutations in a gene encoding a mitochondrial dynamin-related guanosine triphosphatase (OPA1) are associated with an autosomal dominant form of optic atrophy, which together with Leber's hereditary optic neuropathy, is a major cause of blindness in young adults.61,62 Neurodegenerative Diseases A few neurodegenerative disorders are due to mutations in proteins that target the mitochondria. These include Friedreich's ataxia, at least one form of hereditary spastic paraplegia, and Wilson's disease. Friedreich's ataxia is due to expansion of trinucleotide (GAA) repeats in the FRDA gene, which encodes frataxin, a mitochondrion-targeted protein involved in iron homeostasis.63 Excessive free iron resulting from decreased concentrations of frataxin may damage proteins containing iron-sulfur groups, including complexes I, II, and III, and aconitase, a Krebs-cycle enzyme. An autosomal recessive form of hereditary spastic paraplegia is due to mutations in the SPG7 gene, which encodes paraplegin, a mitochondrial protein similar to yeast metalloproteases.64 Impairment of the respiratory chain is suggested by the presence of ragged-red fibers and fibers deficient in cytochrome c oxidase in muscle from affected patients. In Wilson's disease, an autosomal recessive disease characterized by movement disorder and liver failure, there are mutations of the ATP7B gene, which encodes a copper-transporting ATPase, one isoform of which is localized in mitochondria.65 The pathogenesis of Wilson's disease may involve either direct damage to copper-containing enzymes, such as cytochrome c oxidase, or more generic oxidative damage to the cell owing to the accumulation of copper. Mitochondrial dysfunction may be a final common pathogenic mechanism in aging and in Alzheimer's disease, amyotrophic lateral sclerosis, Huntington's disease, progressive supranuclear palsy, and Parkinson's disease.66 Rearrangements of and point mutations in mtDNA may accumulate over time, eventually surpassing the pathogenic threshold in multiple tissues (aging) or in specific areas of the central nervous system (neurodegenerative disorders). Although mtDNA mutations do increase in postmitotic tissues of healthy elderly persons, there is no convincing evidence that they reach deleterious levels.67 The role of mtDNA mutations in neurodegenerative disorders, whether as the cumulative effect of generic mutations or as the specific effect of putative pathogenic mutations, is even more controversial.68 Therapeutic Approaches Therapy for mitochondrial diseases is woefully inadequate. In the absence of a clear understanding of basic pathogenetic mechanisms, treatments have been palliative or have involved the indiscriminate administration of vitamins, cofactors, and oxygen-radical scavengers, with the aim of mitigating, postponing, or circumventing the postulated damage to the respiratory chain.69 Rational therapies, on the whole, remain elusive, but the broad outlines of such approaches are beginning to emerge. For the mtDNA-related disorders, the most promising approach is to reduce the ratio of mutated to wild-type genomes ("gene shifting").70 Such shifting might be accomplished by pharmacologic,71 physiological,70 or even surgical72 approaches. Genetic approaches to treatment are particularly daunting, since they will require targeting not only affected cells, but also the organelles within them. Nevertheless, some headway is being made here as well, although it is limited to in vitro systems. These include the selective destruction of mutant mtDNAs through importation of a restriction enzyme into mitochondria,73 the replacement of a mutant mtDNA-encoded protein with a genetically engineered normal equivalent expressed from the nucleus (allotopic expression),74,75,76 the replacement of a defective respiratory-chain complex with a cognate complex from another organism,77 and the importation of a normal tRNA to compensate for a mutation in the corresponding organellar tRNA.78 As for nuclear mutations, the problems of gene therapy are the same as those encountered in other mendelian disorders. However, pharmacologic treatments might be of use in special cases, such as lowering thymidine concentrations in patients with mitochondrial neurogastrointestinal encephalomyopathy.79 Reports that cytochrome c oxidase deficiency can be reversed by the supplementation of copper in cultured cells with a mutation in SCO2, a copper chaperone, suggest that copper supplementation may be useful in some patients.80,81 The concept of mitochondrial disease was introduced 41 years ago, when Luft and coworkers described a young woman with severe, nonthyroidal hypermetabolism due to loose coupling of oxidation and phosphorylation in muscle mitochondria.82 Only one other patient with Luft's syndrome has been identified.83 Yet nowadays, the possibility of mitochondrial dysfunction needs to be taken into account by every medical subspecialty. Although caution is required in discriminating primary from secondary mitochondrial involvement, progress in this field has been striking enough to amply justify the term "mitochondrial medicine,"84 used by Luft in the title of a review written 32 years after he first described "his" syndrome. Supported in part by grants from the National Institutes of Health (NS11766, NS28828, NS39854, and HD32062) and the Muscular Dystrophy Association. We are indebted to Drs. Eduardo Bonilla, Michio Hirano, and Lewis P. Rowland for their collaboration and helpful suggestions.
From the Departments of Neurology (S.D., E.A.S.) and Genetics and Development (E.A.S.), Columbia University College of Physicians and Surgeons, New York. Address reprint requests to Dr. DiMauro at 4-420 College of Physicians and Surgeons, 630 W. 168th St., New York, NY 10032, or at sd12@columbia.edu. References
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This article is intended for educational purposes only.